1 5' 3' | 2 5' 3' |
gtaggtttccgccgtctcacaggcctcgtgcgcgtagtgccgccgacccaggagcggtcgcccactgtttcgttcgagcggtcatcgccaacgcgattgtgtcctgccctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACGTGGTCCGGGGCCAGAAAGGCGGCCAAGGATACACCGTCATCCACACCG
species | Chlamydomonas reinhardtii |
transcript | EDP04622 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|23361012|gb|BU648832.1|BU648832
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|22076502|gb|BQ825278.1|BQ825278
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|22070752|gb|BQ820090.1|BQ820090
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|15698196|gb|BI722501.1|BI722501
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|22048721|gb|BQ808345.1|BQ808345
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|15694100|gb|BI718405.1|BI718405
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|15701008|gb|BI725313.1|BI725313
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|23360242|gb|BU648062.1|BU648062
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|15697452|gb|BI721757.1|BI721757
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGEST: gi|15699673|gb|BI723978.1|BI723978
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCG
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|49470946|gb|BP098807.1|BP098807
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGEST: gi|15701009|gb|BI725314.1|BI725314
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAG
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACEST: gi|15697341|gb|BI721646.1|BI721646
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
EST: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAG CTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
genomic: GCAACGACACCGGATACAGCCCGTCCCCCAGCGGGCGAGGAGGCAGCGAGgtaggtttcc ... cctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGAC
cactgtttcgttcgagcggtcatcgccaacgcgattgtgtcctgccctgatgcagCTTTCGGTGCTTCAAGGCGAGGTAGACCGCCTACACAAGCTACTCTCAGACGTGGTCCGGGGCCAGAAAGGCGGCCAAGGATACACCGTCATCCACACCG
ccctgat putative branch site (score: 4)
tcctgccct CT-rich tract