1 5' 3' | 2 5' 3' | 3 5' 3' |
TTGCGTCAAGCGCCTGAAGGTGCAGCCTGGCCGGCCCCGCGTGTCGCGGCTGAAGCGCCCCAAGCAGCAACTTGATCTGGCCCCTGCAGGCGTGCTGCCGgtgaggagcatagagggcggttgggcggtgcagggtgcgtcagtgggcagcagtggggcttgggcttgggccggaagtacgcgagtgggctggtcagagg...
species | Chlamydomonas reinhardtii |
transcript | EDP04530 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGAAGCGCCCCAAGCAGCAACTTGATCTGGCCCCTGCAGGCGTGCTGCCG GCCGCCAGAACGTCCACCACGGGCCAGGTGAACGCTTCGCAGGATGGCTGAEST: gi|161815142|gb|FC105300.1|FC105300
genomic: TGAAGCGCCCCAAGCAGCAACTTGATCTGGCCCCTGCAGGCGTGCTGCCGgtgaggagca ... ccgtacgcagGCCGCCAGAACGTCCACCACGGGCCAGGTGAACGCTTCGCAGGATGGCTGA
EST: TGAAGCGCCCCAAGCAGCAACTTGATCTGGCCCCTGCAGGCGTGCTGCCG GCCGCCAGAACGTCCACCACGGG
genomic: TGAAGCGCCCCAAGCAGCAACTTGATCTGGCCCCTGCAGGCGTGCTGCCGgtgaggagca ... ccgtacgcagGCCGCCAGAACGTCCACCACGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGCGTCAAGCGCCTGAAGGTGCAGCCTGGCCGGCCCCGCGTGTCGCGGCTGAAGCGCCCCAAGCAGCAACTTGATCTGGCCCCTGCAGGCGTGCTGCCGgtgaggagcatagagggcggttgggcggtgcagggtgcgtcagtgggcagcagtggggcttgggcttgggccggaagtacgcgagtgggctggtcagagg
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC