1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GGTGTTCCTGGGCGCCCTCAGCGCGGCCCCGGCGGCGGTGGAAGCGATCACGCACCTGACTGCCTTCCGCGGCTTCGCCGGCACCTCGGTGCTCATCATGgtgagagagagagcgtgaaatgggattcgctcgcaaggttgctgtgctcgggttgctctactgcgcctgctcgtggtgctgctggaggaagggtagcgcc...
species | Chlamydomonas reinhardtii |
transcript | EDP04388 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CGCACCTGACTGCCTTCCGCGGCTTCGCCGGCACCTCGGTGCTCATCATG GTGGGTGTGGCCACCGACACGGCCCGCCGCATTCGGGCCGAGCAGGCCATGEST: gi|16429715|gb|BI994941.1|BI994941
genomic: CGCACCTGACTGCCTTCCGCGGCTTCGCCGGCACCTCGGTGCTCATCATGgtgagagaga ... catcctcaagGTGGGTGTGGCCACCGACACGGCCCGCCGCATCCGGGCCGAGCAGGCCATG
EST: CCGGCACCTCGGTGCTCATCATG GTGGGTGTGGCCACCGACACGGCCCGCCGCATCCGGGCCGAGCAGGCCATG
genomic: CCGGCACCTCGGTGCTCATCATGgtgagagaga ... catcctcaagGTGGGTGTGGCCACCGACACGGCCCGCCGCATCCGGGCCGAGCAGGCCATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGTTCCTGGGCGCCCTCAGCGCGGCCCCGGCGGCGGTGGAAGCGATCACGCACCTGACTGCCTTCCGCGGCTTCGCCGGCACCTCGGTGCTCATCATGgtgagagagagagcgtgaaatgggattcgctcgcaaggttgctgtgctcgggttgctctactgcgcctgctcgtggtgctgctggaggaagggtagcgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgggatt
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgctcgt