Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|8513600|gb|BE121495.1|BE121495EST: CCTTGGAGGTTGCGACCTCCAGCTGGCAGGCTGCGCAGTCTTCCACAAAG ATTGCCGTCGCGACCGGTCCCGCGCCCG
genomic: CCTTGGAGGTTGCGACCTCCAGCTGGCAGGCTGCGCAGTCTTCCACAAAGgtatgcagcc ... ttgcccacagATTGCCGTCGCGACCGCTCCCGCGCCCG
EST:
gi|10783317|gb|AV639989.1|AV639989EST: CCTTGGAGGTTGCGACCTCCAGCTGGCAGGCTGCGCAGTCTTCCACAAAG ATTGCCGTCGCGACCGGTCCCGCGCCCGCCGNCACCGNCAGCCCCTTCGCG
genomic: CCTTGGAGGTTGCGACCTCCAGCTGGCAGGCTGCGCAGTCTTCCACAAAGgtatgcagcc ... ttgcccacagATTGCCGTCGCGACCGCTCCCGCGCCCGCCGCCACCGCCAGCCCCTTCGCG
EST:
gi|23364890|gb|BU652710.1|BU652710EST: CCTTGGAGGTTGCGACCTCCAGCTGGCAGGCTGCGCAGTCTTCCACAAAG ATTGCCGTCGCGACCGCTCCCGCGCCCGCCGCCACCGCCAGCCCCTTCGCG
genomic: CCTTGGAGGTTGCGACCTCCAGCTGGCAGGCTGCGCAGTCTTCCACAAAGgtatgcagcc ... ttgcccacagATTGCCGTCGCGACCGCTCCCGCGCCCGCCGCCACCGCCAGCCCCTTCGCG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCCAGGCCTCACCCTGGCATCCACGCTCCAGACCAAGACTTCGGACAAGGCCTTGGAGGTTGCGACCTCCAGCTGGCAGGCTGCGCAGTCTTCCACAAAGgtatgcagcccgaccatgcgggatggcagttgggttcgcgtccaacaacggacgcggtggctgtaatttgtttgtagcagttctttgtgcctgagtgtcatggtgtatggctgcgtttccggttaagtctcaggccacacgggttccgtttctgaagtacatcctttcgttgcccacag
- - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG