1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGCCTACTGGACTACATCAAGCCCGACTTCGTGCACATCATGCAGgtgcgtgcatgtgattgtacgtgtgattgtgatgatgagggatggggccgactgttcgcaagtgtacgggcattgctgtgcgggcgtgtgcgggcaaggg...
species | Chlamydomonas reinhardtii |
transcript | EDP03867 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CGCCTACTGGACTACATCAAGCCCGACTTCGTGCACATCATGCAG GCCGGCGAGATCGTGAAGACAGGCGACATGAGTCTGGTCGACCAGCTGGAGEST: gi|8828623|gb|BE212353.1|BE212353
genomic: CGCCTACTGGACTACATCAAGCCCGACTTCGTGCACATCATGCAGgtgcgtgcat ... tcctggtcagGCCGGCGAGATCGTGAAGACAGGCGACATGAGTCTGGTCGACCAGCTGGAG
EST: CGCCTACTGGACTACATCAAGCCCGACTTCGTGCACATCATGCAG GCCGGCGAGATCGTGAAGACAGGCGACATGAGTCTGGTCGACCAGCTGGAGEST: gi|10778724|gb|AV635404.1|AV635404
genomic: CGCCTACTGGACTACATCAAGCCCGACTTCGTGCACATCATGCAGgtgcgtgcat ... tcctggtcagGCCGGCGAGATCGTGAAGACAGGCGACATGAGTCTGGTCGACCAGCTGGAG
EST: ATCAAGCCCGACTTCGTGCACATCATGCAG GCCGGCGAGATCGTGAAGACAGGCGACATGAGTCTGGTCGACCAGCTGGAGEST: gi|161822561|gb|FC108458.1|FC108458
genomic: ATCAAGCCCGACTTCGTGCACATCATGCAGgtgcgtgcat ... tcctggtcagGCCGGCGAGATCGTGAAGACAGGCGACATGAGTCTGGTCGACCAGCTGGAG
EST: CGCCTACTGGACTACATNCA-GCCCGACTTCGTGCACATCATGCAG GCCGGCGAGATCGTGEST: gi|16072005|gb|BI874001.1|BI874001
genomic: CGCCTACTGGACTACAT-CAAGCCCGACTTCGTGCACATCATGCAGgtgcgtgcat ... tcctggtcagGCCGGCGAGATCGTG
EST: CGCCTACTGGACTACATCAAGCCCGACTTCGTGCACATCATGCAG GCCGGCGAGATCGTGAAGACAGGCGACATGAGTCTGGTCGACCAGCTGGAG
genomic: CGCCTACTGGACTACATCAAGCCCGACTTCGTGCACATCATGCAGgtgcgtgcat ... tcctggtcagGCCGGCGAGATCGTGAAGACAGGCGACATGAGTCTGGTCGACCAGCTGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCCTACTGGACTACATCAAGCCCGACTTCGTGCACATCATGCAGgtgcgtgcatgtgattgtacgtgtgattgtgatgatgagggatggggccgactgttcgcaagtgtacgggcattgctgtgcgggcgtgtgcgggcaaggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgcatgt
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