1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtgcgtgtgtgtgtatgtgtgcggtatgtggatgtgtgcatatgtgtgcgcgcgtgtatgtgcgacactgctggcggcgcgaggccgtaccttacgagggccgccaggctcccgtgtcgcccgtgcctcgctatgtgtctcattaccttaagtgcgtcttgctgtgtgtctcgcagTGTACGACTACGCCTACCTCAACGCCGACACGAACCAGACCGTCAACAAGCTGGTGTTCGTGCACTG
species | Chlamydomonas reinhardtii |
transcript | EDP03860 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CTATGAGCAGTTCATCAACATCCTGCCCGAGAACAACTGCAGATACGGGG TGTACGACTACGCCTACCTTAACGCCEST: gi|22068715|gb|BQ818529.1|BQ818529
genomic: CTATGAGCAGTTCATCAACATCCTGCCCGAGAACAACTGCAGATACGGGGgtgcgtgtgt ... tgtctcgcagTGTACGACTACGCCTACCTCAACGCC
EST: CTATGAGCAGTTCATCAACATCCTGCCCGAGAACAACTGCAGATACGGGG TGTACGACTACGCCTACCTCAACGCCGACACGAACCAGACCGTCAACAAGCEST: gi|14240904|gb|BG859720.1|BG859720
genomic: CTATGAGCAGTTCATCAACATCCTGCCCGAGAACAACTGCAGATACGGGGgtgcgtgtgt ... tgtctcgcagTGTACGACTACGCCTACCTCAACGCCGACACGAACCAGACCGTCAACAAGC
EST: CTATGAGCAGTTCATCAACATCCTGCCCGAGAACAACTGCAGATACGGGG TGTACGACTACGCCTACCTCAACGCCGACACGAACCAGACCGTCAACAAGC
genomic: CTATGAGCAGTTCATCAACATCCTGCCCGAGAACAACTGCAGATACGGGGgtgcgtgtgt ... tgtctcgcagTGTACGACTACGCCTACCTCAACGCCGACACGAACCAGACCGTCAACAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgcgtgtgtgtgtatgtgtgcggtatgtggatgtgtgcatatgtgtgcgcgcgtgtatgtgcgacactgctggcggcgcgaggccgtaccttacgagggccgccaggctcccgtgtcgcccgtgcctcgctatgtgtctcattaccttaagtgcgtcttgctgtgtgtctcgcagTGTACGACTACGCCTACCTCAACGCCGACACGAACCAGACCGTCAACAAGCTGGTGTTCGTGCACTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
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