1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCGGCTCTGGACCCTGAGACTTCCACAGCAATGGGCGCCCAGGGAATAACGGACCACTGCTTTAATGCGCCGCAAGAGCGTGTAAAGTACAAGGGCAAGGgtgaggattatggctccagcagttgtggggttgggagttggggcgcggggcgggagtttccgggcgtggaagggtttccgccgtatcgactgacagccctgtacaggtacttgcactggtgggggaaggacacatgtgttaggtgccgggcctgatgtggctttctttgtgcgctgcag
species | Chlamydomonas reinhardtii |
transcript | EDO98171 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGACCACTGCTTTAATGCGCCGCAAGAGCGTGTAAAGTACAAGGGCAAGG ACGCGAACTACCAGTGGGGAGGGCATCACTGGACGCAGACCACGTGGAACAEST: gi|10789987|gb|AV627353.1|AV627353
genomic: GGACCACTGCTTTAATGCGCCGCAAGAGCGTGTAAAGTACAAGGGCAAGGgtgaggatta ... tgcgctgcagACGCGAACTACCAGTGGGGAGGGCATCACTGGACGCAGACCACGTGGAACA
EST: GGACCACTGCTTTAATGCGCCGCAAGAGCGTGTAAAGTACAAGGGCAAGG ACGCGAACTACCAGTGGGGAGGGCAEST: gi|23365458|gb|BU653278.1|BU653278
genomic: GGACCACTGCTTTAATGCGCCGCAAGAGCGTGTAAAGTACAAGGGCAAGGgtgaggatta ... tgcgctgcagACGCGAACTACCAGTGGGGAGGGCA
EST: GGACCACTGCTTTAATGCGCCGCAAGAGCGTGTAAAGTACAAGGGCAAGG ACGCGAACTACCAGTGGGGAGGGCATCACTGGACGCAGACCACGTGGAACA
genomic: GGACCACTGCTTTAATGCGCCGCAAGAGCGTGTAAAGTACAAGGGCAAGGgtgaggatta ... tgcgctgcagACGCGAACTACCAGTGGGGAGGGCATCACTGGACGCAGACCACGTGGAACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGGCTCTGGACCCTGAGACTTCCACAGCAATGGGCGCCCAGGGAATAACGGACCACTGCTTTAATGCGCCGCAAGAGCGTGTAAAGTACAAGGGCAAGGgtgaggattatggctccagcagttgtggggttgggagttggggcgcggggcgggagtttccgggcgtggaagggtttccgccgtatcgactgacagccctgtacaggtacttgcactggtgggggaaggacacatgtgttaggtgccgggcctgatgtggctttctttgtgcgctgcag
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