Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|6546703|gb|AV392487.1|AV392487EST: GAGGCATTGCTCAAATGCTGCATGGGAATTCGCCGCATTCATACCACAAG TTTCTTTTCCGACGCCGGCATTCGCT
genomic: GAGGCATTGCTCAAATGCTGCATGGGAATTCGCCGCATTCATACCACAAGgtagtgtatt ... tatattgcagTTTCTTTTCCGACGCCGTCATTCGCT
EST:
gi|8933043|gb|BE227804.1|BE227804EST: GAGGCATTGCTCAAATGCTGCATGGGAATTCGCCGCATTCATACCACAAG TTTCTTTTCCGACGCCGACATTCGCTGGGTCTCGCACATTCGCGCGAGTAC
genomic: GAGGCATTGCTCAAATGCTGCATGGGAATTCGCCGCATTCATACCACAAGgtagtgtatt ... tatattgcagTTTCTTTTCCGACGCCGTCATTCGCTGGGTCTCGCACATTCGCGCGAGTAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCGACCTGGCGGCATATTATTTTTATCAACGCCAAATTTAGGTAGCCTGAGAGGCATTGCTCAAATGCTGCATGGGAATTCGCCGCATTCATACCACAAGgtagtgtattgaaggtgtgtgcggcatcacctgtctgattgtgtgtatatattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC