1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagtttatctcaactcacactttttcttcaatgataaaccctttttgtttcagaaactaactcagactgcaattacgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTGATCTACGTTTATCAGAGACCACCACTTTTTCCGCTCTTACCCCATGGGC
species | Arabidopsis thaliana |
transcript | AT5G64540.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCT AATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTGEST: gi|116432280|gb|EG474872.1|EG474872
genomic: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCTgtaagtttat ... acgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTG
EST: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCT AATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTGEST: gi|116432276|gb|EG474868.1|EG474868
genomic: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCTgtaagtttat ... acgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTG
EST: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCT AATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTGEST: gi|116432286|gb|EG474878.1|EG474878
genomic: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCTgtaagtttat ... acgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTG
EST: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCT AATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTGEST: gi|116432275|gb|EG474867.1|EG474867
genomic: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCTgtaagtttat ... acgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTG
EST: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCT AATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTGEST: gi|116432283|gb|EG474875.1|EG474875
genomic: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCTgtaagtttat ... acgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTG
EST: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCT AATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTGEST: gi|116432296|gb|EG474888.1|EG474888
genomic: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCTgtaagtttat ... acgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTG
EST: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCT AATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTEST: gi|116432288|gb|EG474880.1|EG474880
genomic: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCTgtaagtttat ... acgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCT
EST: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCT AATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTGEST: gi|116432290|gb|EG474882.1|EG474882
genomic: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCTgtaagtttat ... acgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTG
EST: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCT AATCCCCTGCACCTGCGGCTATACCCGTACCTGCACCGGCCTCGGTCTCTG
genomic: CACCACAGCAACTCCCATATGATCATTATAGTCCACAGTTTCCATGCGCTgtaagtttat ... acgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTG
aatgataaaccctttttgtttcagaaactaactcagactgcaattacgtttgcagAATCCCCTGCACCTGCAGCTATACCCGTACCTGCACCGGCCTCGGTCTCTGATCTACGTTTATCAGAGACCACCACTTTTTCCGCTCTTACCCCATGGGC
aactaac putative branch site (score: 1)
tttttgttt TA-rich tract