1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtctgttttaagctcttgtctgatacgttgtagtattgtaagtgttatgtctcgagggttgtgattttgattgttgctaatgctagttgttccattttgttcatcatcttctttccagGAGAAGAAGCGGAACACTTTAAGGGACTTTTTGAATGTATCAGGTCCAATGGGTGTTACACATTTCCTTATGCTTTCGAAAACAGCGTCTTCACTGTCTC
species | Arabidopsis thaliana |
transcript | AT5G61770.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGATGGATTTGAGGAAGCTCATGCTTCCCTACACTGCTCTCAGTCTTAAG GAGAAGAAGCCGGAACACTTTAAGGGACTTTTTGAATGTATCAGGTCCAAT
genomic: AGATGGATTTGAGGAAGCTCATGCTTCCCTACACTGCTCTCAGTCTTAAGgtctgtttta ... ttctttccagGAGAAGAAGC-GGAACACTTTAAGGGACTTTTTGAATGTATCAGGTCCAAT
attttgattgttgctaatgctagttgttccattttgttcatcatcttctttccagGAGAAGAAGCGGAACACTTTAAGGGACTTTTTGAATGTATCAGGTCCAATGGGTGTTACACATTTCCTTATGCTTTCGAAAACAGCGTCTTCACTGTCTC
tgctaat putative branch site (score: 2)
ttccattttgttcatc putative PPT
attttgtt TA-rich tract