1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaagtttgtgtttgagtttctctacgaattcgtgttcatatcttttgttttttcagtactatgtgatttactggtttgtgattgatatagAATAAGAAGAGTAGGGTCATTGGGAAACCTATTGCGAAGAAAAATCAAGAGGATGTTAGTCATGTCACTGGGGATAAGATTCCCAAGAGTTTTGTCTTCT
species | Arabidopsis thaliana |
transcript | AT5G61770.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TCTGTAGCTGTTTGGTGAGATAAGAATAATAAATGGGTCGTTTCAAAAAC AATAAGAAGAGTAGGGTCATTGTGAAACCTATTGCGAAGAAAAATCAAGAG
genomic: TCTGTAGCTGTTTGGTGAGATAAGAATAATAAATGGGTCGTTTCAAAAACgtaagtttgt ... attgatatagAATAAGAAGAGTAGGGTCATTGGGAAACCTATTGCGAAGAAAAATCAAGAG
tcatatcttttgttttttcagtactatgtgatttactggtttgtgattgatatagAATAAGAAGAGTAGGGTCATTGGGAAACCTATTGCGAAGAAAAATCAAGAGGATGTTAGTCATGTCACTGGGGATAAGATTCCCAAGAGTTTTGTCTTCT
gattgat putative branch site (score: 4)
ttttgtttttt TA-rich tract