1 5' 3' | 2 5' 3' | 3 5' 3' |
gtaagtttaactgatattattttgtttttcatgccatagcaccttaaaattgctctggcaagtctctgtctttcctagttttttgtttgtgtctgttggatacaattacagtttctgtgccagggaatttgaggactttcagtatagaaaatgaaagttgatacattttatatatccagGTATGCATCAGCACCGCATGAACTCAAACAAGACTGGAACAAATTCACCAAAGACTATTTTCTAAATCGATCAACATTGGTCTCGGTGTTTTTACTAGTT
species | Arabidopsis thaliana |
transcript | AT5G11480.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CATTTCCGGATCAACGACAAGTGGTACTTGGTAGATTTGCCTGGTTACGG GTATGCATCAGCACCGCATGWACTCAAACAAGACTGGAACAAATTCACCAAEST: gi|116474051|gb|EG516643.1|EG516643
genomic: CATTTCCGGATCAACGACAAGTGGTACTTGGTAGATTTGCCTGGTTACGGgtaagtttaa ... atatatccagGTATGCATCAGCACCGCATGAACTCAAACAAGACTGGAACAAATTCACCAA
EST: CATTTCCGGATCAACGACAAGTGGTACTTGGTAGATTTGCCTGGTTACGG GTATGCATCAGCACCGCATGAACTCAAACAAGACTGGAACAAATTCACCAAEST: gi|124767573|gb|EH857703.1|EH857703
genomic: CATTTCCGGATCAACGACAAGTGGTACTTGGTAGATTTGCCTGGTTACGGgtaagtttaa ... atatatccagGTATGCATCAGCACCGCATGAACTCAAACAAGACTGGAACAAATTCACCAA
EST: CATTTCCGGATCAACGACAAGTGGTACTTGGTAGATTTGCCTGGTTACGG GTATGCATCAGCACCGCATGAACTCAAACAAGACTGGAACAAATTCACCAA
genomic: CATTTCCGGATCAACGACAAGTGGTACTTGGTAGATTTGCCTGGTTACGGgtaagtttaa ... atatatccagGTATGCATCAGCACCGCATGAACTCAAACAAGACTGGAACAAATTCACCAA
gaatttgaggactttcagtatagaaaatgaaagttgatacattttatatatccagGTATGCATCAGCACCGCATGAACTCAAACAAGACTGGAACAAATTCACCAAAGACTATTTTCTAAATCGATCAACATTGGTCTCGGTGTTTTTACTAGTT
agttgat putative branch site (score: 5)
aaaatgaaagttgata TA-rich tract