Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116485043|gb|EG527635.1|EG527635EST: AGTCAGCTCTCTGTTCCCTTCATCATCATCTTGTGTCCCTTCTTCAAAAG CATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCT
genomic: AGTCAGCTCTCTGTTCCCTTCATCATCATCTTGTGTCCCTTCTTCAAAAGgtgattatct ... ttcttcacagCATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCT
EST:
gi|116485036|gb|EG527628.1|EG527628EST: AGTCAGCTCTCTGTTCCCTTCATCATCATCTTGTGTCCCTTCTTCAAAAG CATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCT
genomic: AGTCAGCTCTCTGTTCCCTTCATCATCATCTTGTGTCCCTTCTTCAAAAGgtgattatct ... ttcttcacagCATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCT
EST:
gi|116485031|gb|EG527623.1|EG527623EST: TGTCCCTTC-TCAAAAG CATCTAATACCAAGTCGTCGCTGCGCGT-GTGCACATGCATGGTGCGTGCT
genomic: TGTCCCTTCTTCAAAAGgtgattatct ... ttcttcacagCATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCT
EST:
gi|116485029|gb|EG527621.1|EG527621EST: AGTCAGCTCTCTGTTCCCTTCATCATCATCTTGTGTCCCTTCTTCAAAAG CATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCT
genomic: AGTCAGCTCTCTGTTCCCTTCATCATCATCTTGTGTCCCTTCTTCAAAAGgtgattatct ... ttcttcacagCATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGAGCTGAGAAAAGCGATAGTGGAAAGGTACTTGATTCTTACACCATTCAAGTCAGCTCTCTGTTCCCTTCATCATCATCTTGTGTCCCTTCTTCAAAAGgtgattatcttagcctatttactcaccgatgattcattgtgtttagagttctttttttgggtctcttttgttatattttaacatgctattttcttcacag
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