1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtataatcttcaaacttctaagactaagaatgtttcattcacaaaaactgtagcttacagatagataaatcatacataaagtttcctgtagtaatcagtggaacaatttctttatgatcattttaactgcatttttcagGTATCAGATTCTTATAATTTCCAGCGTTTCATGATTTACGTGCACGCAAAAGGGATGATAGTAGATGATGAGTATGTACTCATGGGATCTGCTAATATCA
species | Arabidopsis thaliana |
transcript | AT4G35790.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: GTAAACGAGAGCAGCTTCCAGATGATATGCCAGCCACCAATGGCAGTGTG GTATCAGATTCTTATAATTTCCAGCGTTTCATGATTTACGTGCACGCAAAA
genomic: GTAAACGAGAGCAGCTTCCAGATGATATGCCAGCCACCAATGGCAGTGTGgtataatctt ... catttttcagGTATCAGATTCTTATAATTTCCAGCGTTTCATGATTTACGTGCACGCAAAA
cctgtagtaatcagtggaacaatttctttatgatcattttaactgcatttttcagGTATCAGATTCTTATAATTTCCAGCGTTTCATGATTTACGTGCACGCAAAAGGGATGATAGTAGATGATGAGTATGTACTCATGGGATCTGCTAATATCA
ttttaac putative branch site (score: 2)
catttttc putative PPT
aatttctttatgatca TA-rich tract