1 5' 3' | 2 5' 3' | 3 5' 3' |
gtatattatcaaatcttgaatcttaaatttactttctttgcatcattataagaaactgtgatttggttttaactgttattaactctcgttttaacacgttcaatctaaatccttttgaaataatcagatgcgttgacttataacatttttatctttctttttgtcttgcagATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCACGTGTTATCTTCAAGATCGACTCTAAGTATACTGAGTACTCACCTCAGTA
species | Arabidopsis thaliana |
transcript | AT4G29770.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACG ATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCACEST: gi|86057010|gb|DR352767.1|DR352767
genomic: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACGgtatattatc ... tgtcttgcagATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCAC
EST: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACG ATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCACEST: gi|86057009|gb|DR352766.1|DR352766
genomic: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACGgtatattatc ... tgtcttgcagATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCAC
EST: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACG ATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTBTGCACEST: gi|86057005|gb|DR352762.1|DR352762
genomic: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACGgtatattatc ... tgtcttgcagATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCAC
EST: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACG ATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCACEST: gi|86057006|gb|DR352763.1|DR352763
genomic: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACGgtatattatc ... tgtcttgcagATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCAC
EST: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACG GEST: gi|86057006|gb|DR352763.1|DR352763
genomic: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACGgtatattatc ... tgtcttgcag-
EST: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACG GEST: gi|86057007|gb|DR352764.1|DR352764
genomic: CAAATGTCATCCCGATTGCTTAAAAGCAAACAATGAGCAAGAAGATTACGgtatattatc ... tgtcttgcag-
EST: AATGTCATCCCGATTAGCTTANAAGCAAA-AATGAGCAAGAAGATATACG ATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCA
genomic: AATGTCATCCCGATT-GCTTAAAAGCAAACAATGAGCAAGAAGAT-TACGgtatattatc ... tgtcttgcagATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCA
gaaataatcagatgcgttgacttataacatttttatctttctttttgtcttgcagATGCATGTCAATCTGCAGCTTTGGTAGCTGTGAGTTTGATTAGCTCTGCACGTGTTATCTTCAAGATCGACTCTAAGTATACTGAGTACTCACCTCAGTA
ttataac putative branch site (score: 2)
catttttatctttctt CT-rich tract
acttataacattttta TA-rich tract