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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AACAAGCTGCAGAATCTGGCTGGTCAGCGTTCTGATGTGCTCGAGAATCTGACTCCCAATGTGAGAAAGCGCGTTGATGCCTTGAGGGATATACAGgttagcgaaatttctttcacattttaccaaactatgtgtgctatatatcgtttaatggggtttgttttgttttgtgtgagttttctccctgcttatctgaatttaaagtttcaaaagtaaggtgttgcgttttgattactgatgacttctttccacgcag

Basic information

species Arabidopsis thaliana
transcript AT4G26110.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|164027882|gb|ES072626.1|ES072626
EST:     ATCTGACTCCCAATGTGAGAAAGCGCGTTGATGCCTTGAGGGATATACAG                         AGCCAACATGA
genomic: ATCTGACTCCCAATGTGAGAAAGCGCGTTGATGCCTTGAGGGATATACAGgttagcgaaa ... ttccacgcagAGCCAACATGA
EST: gi|47831827|gb|CK121511.1|CK121511
EST:     ATCTGACTCCCAATGTGAGAAAGCGCGTTGATGCCTTGAGGGATATACAG                         AGCCAACATGATGAACTAGAGGCAAAATTCCGTGAGGAGAGAGCTATTCTT
genomic: ATCTGACTCCCAATGTGAGAAAGCGCGTTGATGCCTTGAGGGATATACAGgttagcgaaa ... ttccacgcagAGCCAACATGATGAACTAGAGGCAAAATTCCGTGAGGAGAGAGCTATTCTT