Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|164212664|gb|ES125569.1|ES125569EST: TGCATAAGCTTGTCGGTGACAG GTGGGAACTGATAGCTGGGAGGATCCCAGGAAGAACCGCTGGAGAAATTGA
genomic: TGCATAAGCTTGTCGGTGACAGgtttgatctt ... ttgatgaaagGTGGGAACTGATAGCTGGGAGGATCCCAGGAAGAACCGCTGGAGAAATTGA
EST:
gi|19878065|gb|AU238896.1|AU238896EST: CAAGAAGAAGAAGATTTGGTCTCTCGAATGCATAAGCTTGTCGGTGACAG GTGGGAACTGATAGCTGGGAGGATCCCAGGAAGAACCGCTGGAGAAATTGA
genomic: CAAGAAGAAGAAGATTTGGTCTCTCGAATGCATAAGCTTGTCGGTGACAGgtttgatctt ... ttgatgaaagGTGGGAACTGATAGCTGGGAGGATCCCAGGAAGAACCGCTGGAGAAATTGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAACAGAAGTGAGTAGTCTTGAGTGGGAAGTTGTGAACATGAGTCAAGAAGAAGAAGATTTGGTCTCTCGAATGCATAAGCTTGTCGGTGACAGgtttgatcttttaactaataatgaatactatttcgtaggaaaataatttaattgtaacaccatagtaaaagctgaattttgtgtgttattatttgatgaaag
- - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG