Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|125146239|gb|EL181108.1|EL181108EST: CTGAAGATGATGATCTCACAGTTGATGACTTATTAAGCTTTGCTAATGAG TATGTCCAACGTGATGAGGAAGGAACAAGAAAG
genomic: CTGAAGATGATGATCTCACAGTTGATGACTTATTAAGCTTTGCTAATGAGgtaatgtaat ... tgaatctcagTATGTCCAACGTGATGAGGAAGGAACAAGAAAG
EST:
gi|19799932|gb|AU231222.1|AU231222EST: TGAAGATGATGATCTCACAGGTTGATGACTTATTAAGCTTTGCTAATGAG TATGTCCAACGTGATGAGGAAGGAACAAGAAAGGAGCGTGAAAGAAGCTTG
genomic: TGAAGATGATGATCTCACA-GTTGATGACTTATTAAGCTTTGCTAATGAGgtaatgtaat ... tgaatctcagTATGTCCAACGTGATGAGGAAGGAACAAGAAAGGAGCGTGAAAGAAGCTTG
EST:
gi|124908165|gb|EH982245.1|EH982245EST: ATGATCTCACAGTTGATGACTTATTAAGCTTTGCTAATGAG TATGTCCAACGTGATGAGGAAGGAACAAGAAAGGAGCGTGAAAGAAGCTTG
genomic: ATGATCTCACAGTTGATGACTTATTAAGCTTTGCTAATGAGgtaatgtaat ... tgaatctcagTATGTCCAACGTGATGAGGAAGGAACAAGAAAGGAGCGTGAAAGAAGCTTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TAGGGAAGAAGCTAAGCGTAGCCCGGAGGTGATTCAATCAGTGACTGTTCCTGAAGATGATGATCTCACAGTTGATGACTTATTAAGCTTTGCTAATGAGgtaatgtaatacttcagttccacagtttttactattaaggatttgtgaatttacttaacaatgaatctcag
- - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG