1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaaattaacaacatttggattttgattgattgacacaatcctcacatgatgaggttttgagtgtgtgttttggctctctcactgagtttgtggaatgtatatttcagTTTCTCTAGTGGAGGTGAAGACGGTTACGTGAGGCTGCATCATTTTGACTCCGACTACTTCAACATCAAGATTTAGATTCCGACTACTTGAACGTCAACC
species | Arabidopsis thaliana |
transcript | AT2G46280.3 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GGTCATTTTGGACCTATAAATGCTTTGGCATTCAATCCTGATGGGAAGAG TTTCTCTAGTGGEST: gi|125081411|gb|EL142644.1|EL142644
genomic: GGTCATTTTGGACCTATAAATGCTTTGGCATTCAATCCTGATGGGAAGAGgtaaattaac ... tatatttcagTTTCTCTAGTGG
EST: GACCTATAAATGCTTTGGCATTCAATCCTGATGGGAAGAG TTTCTCTAGTGGAGGTGAAGACGGTTACGTGAGGCTGCATCATTTTGACTCEST: gi|164037758|gb|ES148773.1|ES148773
genomic: GACCTATAAATGCTTTGGCATTCAATCCTGATGGGAAGAGgtaaattaac ... tatatttcagTTTCTCTAGTGGAGGTGAAGACGGTTACGTGAGGCTGCATCATTTTGACTC
EST: GTCATTTTGGACCTATAAATGCTTTGGCATTCAATCCTGATGGGGAAGAG TTTCTCTAGTGGAGGTGAAGACGGTTACGTGAGGC
genomic: GTCATTTTGGACCTATAAATGCTTTGGCATTCAATCCTGATGGG-AAGAGgtaaattaac ... tatatttcagTTTCTCTAGTGGAGGTGAAGACGGTTACGTGAGGC
ggttttgagtgtgtgttttggctctctcactgagtttgtggaatgtatatttcagTTTCTCTAGTGGAGGTGAAGACGGTTACGTGAGGCTGCATCATTTTGACTCCGACTACTTCAACATCAAGATTTAGATTCCGACTACTTGAACGTCAACC
ctctcac putative branch site (score: 3)
aatgtatattt TA-rich tract