1 5' 3' | 2 5' 3' | 3 5' 3' |
gtagttatatctctgtttttttttcttcacttgctatgaatgataggactttgtgtcttcttcttgaatggtgttggaatgatattgtgatgtgatttgatctgactggtaattttgtttgtgcagACTGTACATGAGGGTCGGATTTATCAGTTGAAGCTCTTCTGTGACAAAGATTACCCTGAGAAACCTCCGACTGTTCGGTTCCATTCGCGTATCAACATGA
species | Arabidopsis thaliana |
transcript | AT2G36060.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ATGMCATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAAC ACTGTACATGAGGGTCGGATTTATCAGTTGAAGCTCTTCTGTGACAAAGATEST: gi|116467250|gb|EG509842.1|EG509842
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAACgtagttatat ... gtttgtgcagACTGTACATGAGGGTCGGATTTATCAGTTGAAGCTCTTCTGTGACAAAGAT
EST: ATGACATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAAC GEST: gi|116467250|gb|EG509842.1|EG509842
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAACgtagttatat ... gtttgtgcag-
EST: ATGACATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAAC GEST: gi|116467250|gb|EG509842.1|EG509842
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAACgtagttatat ... gtttgtgcag-
EST: ATGACATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAAC GEST: gi|124964017|gb|EL038312.1|EL038312
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAACgtagttatat ... gtttgtgcag-
EST: TTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAAC ACTGTACATGAGGGTCGGATTTATCAGTTGAAGCTCTTCTGTGACAAAGEST: gi|116466784|gb|EG509376.1|EG509376
genomic: TTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAACgtagttatat ... gtttgtgcagACTGTACATGAGGGTCGGATTTATCAGTTGAAGCTCTTCTGTGACAAAG
EST: ATGACATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAAC ACTGTACATGAGGGTCGGATTTATCAGTTGAAGCTCTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAACgtagttatat ... gtttgtgcagACTGTACATGAGGGTCGGATTTATCAGTTGAAGCTCTTCTGTGACAAAGAT
tgttggaatgatattgtgatgtgatttgatctgactggtaattttgtttgtgcagACTGTACATGAGGGTCGGATTTATCAGTTGAAGCTCTTCTGTGACAAAGATTACCCTGAGAAACCTCCGACTGTTCGGTTCCATTCGCGTATCAACATGA
atctgac putative branch site (score: 3)
ttttgttt putative PPT
taattttgttt TA-rich tract