1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AGACTCGCGGAAGCTCTTGATGCTGATGTCAAACGGTGGTCGAGTGGAAAGGAAAACAACTTACGGGCGTTGATCTCAACACTCCAATATgtaatttgtttaccccatatgtccacagctcttaagtcttacctctttaatggattagatgataagtcttaaacaaatgttctttgcag
species | Arabidopsis thaliana |
transcript | AT1G75310.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AGTGGAAAGGAAAACAACTTACGGGCGTTGATCTCAACACTCCAATAT ATACTTGGAGCAGAGAGTGGATGGAAACCGATTCCTCTCACTGATCTTGEST: gi|164216983|gb|ES029567.1|ES029567
genomic: AGTGGAAAGGAAAACAACTTACGGGCGTTGATCTCAACACTCCAATATgtaatttgtt ... ttctttgcagATACTTGGAGCAGAGAGTGGATGGAAACCGATTCCTCTCACTGATCTTG
EST: CAACTTACGGGCGTTGATCTCAACACTCCAATAT ATACTTGGAGCAGAGAGTGGATGGAAACC
genomic: CAACTTACGGGCGTTGATCTCAACACTCCAATATgtaatttgtt ... ttctttgcagATACTTGGAGCAGAGAGTGGATGGAAACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGACTCGCGGAAGCTCTTGATGCTGATGTCAAACGGTGGTCGAGTGGAAAGGAAAACAACTTACGGGCGTTGATCTCAACACTCCAATATgtaatttgtttaccccatatgtccacagctcttaagtcttacctctttaatggattagatgataagtcttaaacaaatgttctttgcag
- - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - AAGGAA