Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|124931815|gb|EL009137.1|EL009137EST: GAAAGAAATGGTTACATACAAGATTTGGGTGATGTCTTTCATCATAGCAG GAGCTATTTTAGGAGGAA
genomic: GAAAGAAATGGTTACATACAAGATTTGGGTGATGTCTTTCATCATAGCAGgttcaactta ... aatccactagGAGCTATTTTAGGAGGAA
EST:
gi|125063994|gb|EL131774.1|EL131774EST: GAAAGAAATGGTTACATACAAGATTTGGGTGATGTCTTTCATCATAGCAG GAGCTATTTTAGGAGGAA
genomic: GAAAGAAATGGTTACATACAAGATTTGGGTGATGTCTTTCATCATAGCAGgttcaactta ... aatccactagGAGCTATTTTAGGAGGAA
EST:
gi|125278518|gb|EL292603.1|EL292603EST: TGATGTCTTTCATCATAGCAG GAGCTATTTTAGGAGGAATAATCCCTGGGGTTACTA
genomic: TGATGTCTTTCATCATAGCAGgttcaactta ... aatccactagGAGCTATTTTAGGAGGAATAATCCCTGGAGTTACTA
EST:
gi|125085901|gb|EL145568.1|EL145568EST: GAAAGAAATGGTTACATACAAGATTTGGGTGATGTCTTTCATCATAGCAG GAGCTATTTTAGGAGGAA
genomic: GAAAGAAATGGTTACATACAAGATTTGGGTGATGTCTTTCATCATAGCAGgttcaactta ... aatccactagGAGCTATTTTAGGAGGAA
EST:
gi|116433223|gb|EG475815.1|EG475815EST: GAAAGAAATGGTTACATACAAGATTTGGGTGATGTCTTTCATCATAGCAG GAGCTATTTTAGGAGGAATAATCCCTGGAGTTACTACAACAAAGACAGCGA
genomic: GAAAGAAATGGTTACATACAAGATTTGGGTGATGTCTTTCATCATAGCAGgttcaactta ... aatccactagGAGCTATTTTAGGAGGAATAATCCCTGGAGTTACTACAACAAAGACAGCGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTCATCTATATATAACCCAGGAGAAGCAGAAATCTTCCAAGAAAGAAATGGTTACATACAAGATTTGGGTGATGTCTTTCATCATAGCAGgttcaacttataaaaaaggaattcctctcctcaatttggttagcaattacacaatcagaaatttaatcaaattttgtgtttcattgttttgaaaaatccactag
- - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - AAGAAA