Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|124918115|gb|EH991983.1|EH991983EST: AGACTCTGCAGCTAACGTTGTGATCACTAGCTTCTCTTCATCTTCTCAAG AAGAAGAAAGCCAAGAG
genomic: AGACTCTGCAGCTAACGTTGTGATCACTAGCTTCTCTTCATCTTCTCAAGgtaattattc ... aaatctgcagAAGAAGAAAGCCAAGAG
EST:
gi|116475557|gb|EG518149.1|EG518149EST: AGACTCTGCAGCTAACGTTGTGATCACTAGCTTCTCTTCATCTTCTCAAG AAGAAGAAAGCCAAGAGAGTTTTGATCATATACAAGATGAACCTTTATGCG
genomic: AGACTCTGCAGCTAACGTTGTGATCACTAGCTTCTCTTCATCTTCTCAAGgtaattattc ... aaatctgcagAAGAAGAAAGCCAAGAGAGTTTTGATCATATACAAGATGAACCTTTATGCG
EST:
gi|116475558|gb|EG518150.1|EG518150EST: AGACTCTGCAGCTAACGTTGTGATCACTAGCTTCTCTTCATCTTCTCAAG AAGAAGAAAGCCAAGAGAGTTTTGATCATATACAAGATGAACCTTTATGCG
genomic: AGACTCTGCAGCTAACGTTGTGATCACTAGCTTCTCTTCATCTTCTCAAGgtaattattc ... aaatctgcagAAGAAGAAAGCCAAGAGAGTTTTGATCATATACAAGATGAACCTTTATGCG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CGACTCTGTTTTAATAATCCATTCTCCTCCATTAAAGACACCTCTCTTCAAGACTCTGCAGCTAACGTTGTGATCACTAGCTTCTCTTCATCTTCTCAAGgtaattattcaacttcttcaatattgtgtatatccaaaaactgaatggatttttttaactttagggttgttttctaaatctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT