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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGACAGAAGTCGAAGATGTCGATTGGGAAAGCACTTTCTACGTTCGTCACCTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatgtttttagaaaaatactattttagatcgaatgttatattcatttagtgataaataatatttattttcttctatgaaaaaaattagtcacca...

Basic information

species Arabidopsis thaliana
transcript AT1G62380.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|124797015|gb|EH886694.1|EH886694
EST:     CAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGG
genomic: CAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGG
EST: gi|124882527|gb|EH961429.1|EH961429
EST:     GTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: GTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|301501399|gb|HO206939.1|HO206939
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125240648|gb|EL254733.1|EL254733
EST:     ATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: ATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125092737|gb|EL150560.1|EL150560
EST:     TTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAA
genomic: -TCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAA
EST: gi|301501473|gb|HO207013.1|HO207013
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125156958|gb|EL186307.1|EL186307
EST:     ATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: ATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125050814|gb|EL123083.1|EL123083
EST:     TGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: TGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|124935131|gb|EL012142.1|EL012142
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAA
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAA
EST: gi|125313676|gb|EL327761.1|EL327761
EST:     TCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: TCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125059625|gb|EL128302.1|EL128302
EST:     CAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAG
genomic: CAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAG
EST: gi|47827832|gb|CK117516.1|CK117516
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|47829880|gb|CK119564.1|CK119564
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|47830810|gb|CK120494.1|CK120494
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|124797410|gb|EH887089.1|EH887089
EST:     TCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATAGAATACAG                         GACGGCCATGAAAGACTTTGGTAA
genomic: TCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGAT-GAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAA
EST: gi|125192365|gb|EL207319.1|EL207319
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGA
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGA
EST: gi|124755050|gb|EH845180.1|EH845180
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAA
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAA
EST: gi|125031701|gb|EL103970.1|EL103970
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAG
EST: gi|124890616|gb|EH969518.1|EH969518
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATAGAAAG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCAT-GAAAG
EST: gi|116484386|gb|EG526978.1|EG526978
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125307241|gb|EL321326.1|EL321326
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTA
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTA
EST: gi|125033303|gb|EL105572.1|EL105572
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGA
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGA
EST: gi|125313572|gb|EL327657.1|EL327657
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGA
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGA
EST: gi|125190065|gb|EL205019.1|EL205019
EST:     ACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: ACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|124847012|gb|EH931449.1|EH931449
EST:     TTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTAGAGGATT
genomic: TTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCT-GAGGATT
EST: gi|116424066|gb|EG466658.1|EG466658
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|116424068|gb|EG466660.1|EG466660
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125248691|gb|EL262776.1|EL262776
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAAT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAAT
EST: gi|116484431|gb|EG527023.1|EG527023
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|124826918|gb|EH911784.1|EH911784
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCCGATGAATACAG                         GACGGCCATGAAAG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAG
EST: gi|125245434|gb|EL259519.1|EL259519
EST:     TCCAATCTCAATGACATTTCAGATTGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: TCCAATCTCAATGACATTTCAGA-TGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125274198|gb|EL288283.1|EL288283
EST:     GACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: GACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125276560|gb|EL290645.1|EL290645
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAG
EST: gi|125228217|gb|EL242302.1|EL242302
EST:     TGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: TGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|124746132|gb|EH836632.1|EH836632
EST:     TCCCTCAATTCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAG
genomic: TCCCTCAA-TCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAG
EST: gi|124933038|gb|EL010240.1|EL010240
EST:     AGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: AGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|116424067|gb|EG466659.1|EG466659
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|301503168|gb|HO208708.1|HO208708
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125096518|gb|EL153292.1|EL153292
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAGTACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAAT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAAT
EST: gi|124730708|gb|EH822110.1|EH822110
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAG
EST: gi|124926476|gb|EL004309.1|EL004309
EST:     CCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTG
genomic: CCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTG
EST: gi|124722132|gb|EH813534.1|EH813534
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGC
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGC
EST: gi|124774951|gb|EH865080.1|EH865080
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAAT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAAT
EST: gi|124795113|gb|EH884792.1|EH884792
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTG
EST: gi|125052307|gb|EL124140.1|EL124140
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAAT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAAT
EST: gi|125301867|gb|EL315952.1|EL315952
EST:     TCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACCAG                         GACGGCCATGAAAGACTTTGGTAAGA
genomic: TCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATAC-AGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGA
EST: gi|124954647|gb|EL029726.1|EL029726
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAG
EST: gi|124833808|gb|EH918247.1|EH918247
EST:     CTCCCNCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGC
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGC
EST: gi|47830329|gb|CK120013.1|CK120013
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125133850|gb|EL175098.1|EL175098
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTT
EST: gi|124927390|gb|EL005131.1|EL005131
EST:     TTTCAGATGTGTCTGATGAGTACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: TTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|125169418|gb|EL193467.1|EL193467
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTG
EST: gi|124825221|gb|EH910087.1|EH910087
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAA
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAA
EST: gi|116424069|gb|EG466661.1|EG466661
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|124792698|gb|EH882377.1|EH882377
EST:     TGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
genomic: TGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACTGGAGAATCTTGCTGAGGATTT
EST: gi|124859653|gb|EH944090.1|EH944090
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAGACTTTGGTAAGAGACT
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAGACTTTGGTAAGAGACT
EST: gi|124719630|gb|EH811032.1|EH811032
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAG
EST: gi|125102874|gb|EL157476.1|EL157476
EST:     CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAG                         GACGGCCATGAAAG
genomic: CTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatg ... gatttggcagGACGGCCATGAAAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGACAGAAGTCGAAGATGTCGATTGGGAAAGCACTTTCTACGTTCGTCACCTCCCTCAATCCAATCTCAATGACATTTCAGATGTGTCTGATGAATACAGgtacataatgtttttagaaaaatactattttagatcgaatgttatattcatttagtgataaataatatttattttcttctatgaaaaaaattagtcacca

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaaaa