Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116468628|gb|EG511220.1|EG511220EST: ATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAG CTGATTCAAGAAACTCTCTGAAGCTATTGGAGGATGAGATTTGTCGTTTGA
genomic: ATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAGgtttctgaat ... tttcttaaagCTGATTCAAGAAACTCTCTGAAGCTATTGGAGGATGAGATTTGTCGTTTGA
EST:
gi|116468629|gb|EG511221.1|EG511221EST: ATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAG CTGATTCAAGAAACTCTCTGAAGCTATTGGAGGATGAGATTTGTCGTTTGA
genomic: ATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAGgtttctgaat ... tttcttaaagCTGATTCAAGAAACTCTCTGAAGCTATTGGAGGATGAGATTTGTCGTTTGA
EST:
gi|116468626|gb|EG511218.1|EG511218EST: ATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAG CTGATTCAAGAAACTCTCTGAAGCTGTTGGAGGATGAGATTTGTCGTTTGA
genomic: ATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAGgtttctgaat ... tttcttaaagCTGATTCAAGAAACTCTCTGAAGCTATTGGAGGATGAGATTTGTCGTTTGA
EST:
gi|116468625|gb|EG511217.1|EG511217EST: ATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAG CTGATTCAAGAAACTCTCTGAAGCTGTTGGAGGATGAGATTTGTCGTTTGA
genomic: ATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAGgtttctgaat ... tttcttaaagCTGATTCAAGAAACTCTCTGAAGCTATTGGAGGATGAGATTTGTCGTTTGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGTTCTGAGACGGAATCGGCTCTGTCTGTCAAAGAAGCTGAGCTTACTAAATCGTTCCTTGCTTCTCAGTTCGAGATCAATGGTTTGATCTCCGTTACAGgtttctgaatttgagtcgcttctaatttctgaatttgttttttgtttctgtgttgttaaatctctatcactatgttttattttcttaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA