1 5' 3' | 2 5' 3' | 3 5' 3' |
CCACCGTTTCTGCAACAATCTCTTGAATAGAAGAATTAGTGTTCCTCGAAGCTCCGCTATTAGTGACGGTGGTGTCTCCTACAATACTCTAGTCTCCGAGgtaagccaagtttcagggcaaattttctaattcatcttgatttttagtagatttgtgtagtttatgatcataattgaattgggtctggctttaattttga...
species | Arabidopsis thaliana |
transcript | AT1G44000.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTACAATACTCTAGTCTCCGAG GCGGTGAGGCTTTTGGTTCCACAAGCAAACTTTGATTCTTCAAAGCTTAAAEST: gi|164228144|gb|ES068188.1|ES068188
genomic: CCTACAATACTCTAGTCTCCGAGgtaagccaag ... gtgttattagGCGGTGAGGCTTTTGGTTCCACAAGCAAACTTTGATTCTTCAAAGCTTAAA
EST: GCTCCGCTATTAGTGACGGTGGTGTCTCCTACAATACTCTAGTCTCCGAG GCGGTGAGGCTTTTGGEST: gi|164114133|gb|ES039283.1|ES039283
genomic: GCTCCGCTATTAGTGACGGTGGTGTCTCCTACAATACTCTAGTCTCCGAGgtaagccaag ... gtgttattagGCGGTGAGGCTTTTGG
EST: GCTCCGCTATTAGTGACGGTGGTGTCTCCTACAATACTCTAGTCTCCGAG GCGGTGAGGCTTTTGGTTCCACAAGC
genomic: GCTCCGCTATTAGTGACGGTGGTGTCTCCTACAATACTCTAGTCTCCGAGgtaagccaag ... gtgttattagGCGGTGAGGCTTTTGGTTCCACAAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCACCGTTTCTGCAACAATCTCTTGAATAGAAGAATTAGTGTTCCTCGAAGCTCCGCTATTAGTGACGGTGGTGTCTCCTACAATACTCTAGTCTCCGAGgtaagccaagtttcagggcaaattttctaattcatcttgatttttagtagatttgtgtagtttatgatcataattgaattgggtctggctttaattttga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - agggcaaa