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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtgaacacaacaaaaatatatttgctaatgatgtgatgatgatacttgatctaactaattaacatatgaatggttctgtctcagGCGGAACAAGGCGCTGGTGCAAGAACTAAGCGTGCCTCCCCAAGGAGCGACTGATCTCTACTTTGCCACACAGTTTTCACAGAACACATGGGGACAATTC

Basic information

species Arabidopsis thaliana
transcript AT1G15210.1
intron # 8
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gatgtgatgatgatacttgatctaactaattaacatatgaatggttctgtctcagGCGGAACAAGGCGCTGGTGCAAGAACTAAGCGTGCCTCCCCAAGGAGCGACTGATCTCTACTTTGCCACACAGTTTTCACAGAACACATGGGGACAATTC
                           aattaac  putative branch site (score: 2)
                                            ttctgtctc  putative PPT
                      taactaattaacatat  TA-rich tract