Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|124749324|gb|EH839454.1|EH839454EST: ATAAGCAGTAGCAGCAAG GCTTTCATGTTGCAGAAGGAGACCTCCCTAAGGAGACTTAGAAAGAAAAGA
genomic: ATAAGCAGTAGCAGCAAGgttgactttg ... tcttgtgcagGCTTTCATGTTGCAGAAGGAGACCTCCCTAAGGAGACTTAGAAAGAAAAGA
EST:
gi|116446855|gb|EG489447.1|EG489447EST: GGGAGATAAGGATGAGTACCATGATGCTTCGGATAAGCAGTAGCAGCAAG GCTTTCATGTTGCAGAAGGAGACCTCCCTAAGGAGACTTAGAAAGAAAAGA
genomic: GGGAGATAAGGATGAGTACCATGATGCTTCGGATAAGCAGTAGCAGCAAGgttgactttg ... tcttgtgcagGCTTTCATGTTGCAGAAGGAGACCTCCCTAAGGAGACTTAGAAAGAAAAGA
EST:
gi|125297960|gb|EL312045.1|EL312045EST: CTTCGGATAAGCAGTAGCAGCAAG GCTTTCATGTTGCAGAAGGAGACCTCCCTAAGGAGACT-AGAAAGAAAAGA
genomic: CTTCGGATAAGCAGTAGCAGCAAGgttgactttg ... tcttgtgcagGCTTTCATGTTGCAGAAGGAGACCTCCCTAAGGAGACTTAGAAAGAAAAGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTGATGGACAGTGATAAACTTCATACAGTGCCTGAGGTGGCTGAAGAAGAGGGAGATAAGGATGAGTACCATGATGCTTCGGATAAGCAGTAGCAGCAAGgttgactttgaatgcatgtcagtttcaatttacttaggaatattatatacaatcagtaatactctgctcggatcaagctttgacctttagaatgattgga
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG