Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|19799626|gb|AU230916.1|AU230916EST: GCAAGCAATCTGGTGACCAAGAAGCTCCTGTTATCTTCCTTAAGCATAAT GTGGTAGATGAATATGATGAACAATCTGAAGGTCGCAGAAAGGCTCCGTAT
genomic: GCAAGCAATCTGGTGACCAAGAAGCTCCTGTTATCTTCCTTAAGCATAATgtgagtttct ... ctatttgcagGTGGTAGATGAATATGATGAACAATCTGAA-GTCGCAGAAAGGCTCCGTAT
EST:
gi|86078935|gb|DR374692.1|DR374692EST: GCAAGCAATCTGGTGACCAAGAAGCTCCTGTTATCTTCCTTAAGCATAAT GTGGTAGATGAATATGATGAACAATCTGAAGTCGCAGAAAGGCTCCGTATC
genomic: GCAAGCAATCTGGTGACCAAGAAGCTCCTGTTATCTTCCTTAAGCATAATgtgagtttct ... ctatttgcagGTGGTAGATGAATATGATGAACAATCTGAAGTCGCAGAAAGGCTCCGTATC
EST:
gi|124980526|gb|EL053473.1|EL053473EST: GCAATCTGGTGACCAAGAAGCTCCTGTTATCTTCCTTAAGCATAAT GTGGTAGATGAATATGA
genomic: GCAATCTGGTGACCAAGAAGCTCCTGTTATCTTCCTTAAGCATAATgtgagtttct ... ctatttgcagGTGGTAGATGAATATGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CACTGCATGTGGGAGTTGTAAATACATAGAGCAGGGCTTCTCAAAACTGTGCAAGCAATCTGGTGACCAAGAAGCTCCTGTTATCTTCCTTAAGCATAATgtgagtttctgatctctcatctttgatgtataaacaataaagaagtagagaaaaaatccattaatagctctaatgctgctatttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC