Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|162263742|gb|FC439641.1|FC439641EST: TCACATGATTGTGGACGAACAAAGAAATTCCTACGATATTCTATTTTTAG GTAATGCTGCATATAAACAGCCTGATGCTAGATGTCGCATGGTAGATTTGT
genomic: TCACATGATTGTGGACGAACAAAGAAATTCCTACGATATTCTATTTTTAGgtatttttta ... gtttttgcagGTAATGCTGCATATAAACAGCCTGATGCTAGATGTCGCATGGTAGATTTGT
EST:
gi|162169006|gb|FC345688.1|FC345688EST: TCACATGATTGTGGACGAACAAAGAAATTCCTACGATATTCTATTTTTAG GTAATGCTGCATATAAACAGCCTGATGCTAGATGTCGCATGGTAGATTTGT
genomic: TCACATGATTGTGGACGAACAAAGAAATTCCTACGATATTCTATTTTTAGgtatttttta ... gtttttgcagGTAATGCTGCATATAAACAGCCTGATGCTAGATGTCGCATGGTAGATTTGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGGAAGGAGCTTCTTCCGGTGAGCTTAGATTCTAAAGCTCCAATAATCAGTCACATGATTGTGGACGAACAAAGAAATTCCTACGATATTCTATTTTTAGgtattttttattacgcccactgcctgcccctcatttgtatccagtctcaatgagttttatctcgtggttcaagtttacattttctgaatgatcgtgtaaaattttaatctcttaacaaattattttgcagtctcaaaagcttcctgggacacacggggactttctgttgtttttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA