1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CAGAGAAAATGCTTATTCAAATGGTTGAAACTGAGTTGGAGAAGAGAAAGCAACAGGGCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGGgtactccgtctattttagatataccgttcttggagttgctaggattgataatattaattgctatgagacagaaaaatatgaagaggtcctatggtcctgc...
species | Glycine max |
transcript | GLYMA17G01360.1 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CAACAGGGCACATATAAAGGAGGATTTAGGGGGCAGTCCCACTTTTTCGG CTATGAAGGGAGATGTGGCTTGCCAACTAATTTTGATTCTACTTACTGCTAEST: gi|19348946|gb|BM893478.1|BM893478
genomic: CAACAGGGCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGGgtactccgtc ... aaatatgcagCTATGAAGGGAGATGTGGCTTGCCAACGAATTTTGATTCTACTTACTGCTA
EST: CAACAGGGCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGG CTATGAAGGGAGATGTGGCTTGCCAACGAATTTTGATTCTACTTACTGCTAEST: gi|7924124|gb|AW830150.1|AW830150
genomic: CAACAGGGCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGGgtactccgtc ... aaatatgcagCTATGAAGGGAGATGTGGCTTGCCAACGAATTTTGATTCTACTTACTGCTA
EST: GCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGG CTATGAAGGGAGATGTGGCTTGCCAACGAATTTTGATTCTACTTACTGCTAEST: gi|254317928|gb|GR832096.1|GR832096
genomic: GCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGGgtactccgtc ... aaatatgcagCTATGAAGGGAGATGTGGCTTGCCAACGAATTTTGATTCTACTTACTGCTA
EST: CAACAGGGCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGG CTATGAAGGGAGATGTGGCTTGCCAACGAATTTTGATTCTACTTACTGCTAEST: gi|208311116|gb|GE108520.1|GE108520
genomic: CAACAGGGCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGGgtactccgtc ... aaatatgcagCTATGAAGGGAGATGTGGCTTGCCAACGAATTTTGATTCTACTTACTGCTA
EST: GGGCTCATATAAAGGCGGATTTAAGGGGGACAAGTACCCAACTTTTTCGG CTATGAAGGGAGATGTGGCTTEST: gi|5342423|gb|AI794707.1|AI794707
genomic: GGGCTCATATAAAGGCGGATTTA-GGGGG-CA-GT-CCCA-CTTTTTCGGgtactccgtc ... aaatatgcagCTATGAAGGGAGATGTGGCTT
EST: CAACAGGGCACATATAAAGGAGGATTTAGGGGGCAGTCCCACTTTTTCGG CTATGAAGGGAGATGTGGCTTGCCAACTAATTTTGATTCTACTTACTGCTAEST: gi|207710299|gb|GD689765.1|GD689765
genomic: CAACAGGGCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGGgtactccgtc ... aaatatgcagCTATGAAGGGAGATGTGGCTTGCCAACGAATTTTGATTCTACTTACTGCTA
EST: CAACAGGGCACATATAAAGGAGGATTTAGGGGGCAGTCCCACTTTTTCGG CTATGAAGGGAGATGTGGCTTGCCAACTAATTTTGATTCTACTTACTGCTA
genomic: CAACAGGGCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGGgtactccgtc ... aaatatgcagCTATGAAGGGAGATGTGGCTTGCCAACGAATTTTGATTCTACTTACTGCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGAGAAAATGCTTATTCAAATGGTTGAAACTGAGTTGGAGAAGAGAAAGCAACAGGGCTCATATAAAGGCGGATTTAGGGGGCAGTCCCACTTTTTCGGgtactccgtctattttagatataccgttcttggagttgctaggattgataatattaattgctatgagacagaaaaatatgaagaggtcctatggtcctgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaaaaata