1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CAACATTCTTCTGGGGAAAATATGCTTTGGAAATGTCTGCTGTTGTATACAAGGATTGGGTTTTCCCTGAGCAGGCACTACCTGCTGATCTTGTTAAGAGgtaatccttacaagttataagcacgtatctaaaatatttagatcctagttcttttcattacttgagataaaaaaaaatgatgttaatgttatttttctttgcttgttatccag
species | Glycine max |
transcript | GLYMA08G20230.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AAGGATTGGGTTTTCCCTGAGCAGGCACTACCTGCTGATCTTGTTAAGAG AGGTGTGGCTGTTGAGGATTCATCTTCTCCACATGGTCTTCGTCTTTTGATEST: gi|192316867|gb|FK010840.1|FK010840
genomic: AAGGATTGGGTTTTCCCTGAGCAGGCACTACCTGCTGATCTTGTTAAGAGgtaatcctta ... tgttatccagAGGTGTGGCTGTTGAGGATTCATCTTCTCCACATGGTCTTCGTCTTTTGAT
EST: AAGGATTGGGTTTTCCCTGAGCAGGCACTACCTGCTGATCTTGTTAAGAG AGGTGTGGCTGTTGAGGATTCATCTTCTCCACATGGTCTTCGTCTTTTGAT
genomic: AAGGATTGGGTTTTCCCTGAGCAGGCACTACCTGCTGATCTTGTTAAGAGgtaatcctta ... tgttatccagAGGTGTGGCTGTTGAGGATTCATCTTCTCCACATGGTCTTCGTCTTTTGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAACATTCTTCTGGGGAAAATATGCTTTGGAAATGTCTGCTGTTGTATACAAGGATTGGGTTTTCCCTGAGCAGGCACTACCTGCTGATCTTGTTAAGAGgtaatccttacaagttataagcacgtatctaaaatatttagatcctagttcttttcattacttgagataaaaaaaaatgatgttaatgttatttttctttgcttgttatccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT