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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATTGAGCATGTTGGAGGGGATATGTTCGCAAAAGTTCCACAGGGTGACACCATAATACTAAAGgttagaatacatagtaaacacctaactatatgcatctaatctcattgttaaggtggtaactcttaatttttctgtccttgatgatattgttgtag

Basic information

species Glycine max
transcript GLYMA20G31700.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22523847|gb|BU082658.1|BU082658
EST:     GAGGCGATATGTTTGCAAGAGTTCCACAGGGTGACGCCATAATACTGAAG                         GCTGTATACCACAATTGGTCAGACGAAAAATGCATAGAATTTCTGAGGAAT
genomic: GAGGGGATATGTTCGCAAAAGTTCCACAGGGTGACACCATAATACTAAAGgttagaatac ... attgttgtagGCTGTATGCCACAATTGGTCAGACGAAAAATGCATAGAATTTCTGAGGAAT
EST: gi|193726182|gb|FK656458.1|FK656458
EST:     GAGGGGATATGTTCGCAAAAGTTCCACAGGGCGACACCATAATACTAAAG                         GCTGTATGCCACAATTGGTCAGAACGAAAAATGCATAGAATTTCTGAGGAA
genomic: GAGGGGATATGTTCGCAAAAGTTCCACAGGGTGACACCATAATACTAAAGgttagaatac ... attgttgtagGCTGTATGCCACAATTGGTCAGA-CGAAAAATGCATAGAATTTCTGAGGAA