1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AGTGAACCATGGCCATCCATATCAGACAGTGCTAAAGACCTAGTCAGGAAGATGCTGACACAGGATCCAAACAAGCGGATTACTTCTTCTCAAGTCCTTGgtactagattactctttctgttttgactaaagtaacttttatcaacacagtatttatttaatctaattaaattaaaaagtgttattttttttgttagtac...
species | Glycine max |
transcript | GLYMA17G01730.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GATGCTGACACAGGATCCAAACAAGCGGATTACTTCTTCTCAAGTCCTTG AACACCCATGGATGAGAGAAGGTGGAGATGCATCTGATAAACCAATCGATAEST: gi|46492915|gb|CN472471.1|CN472471
genomic: GATGCTGACACAGGATCCAAACAAGCGGATTACTTCTTCTCAAGTCCTTGgtactagatt ... gtttggtaagAACACCCATGGATGAGAGAAGGTGGAGATGCATCTGATAAACCAATCGATA
EST: GATGCTGACACAGGATCCAAACAAGCGGATTACTTCTTCTCAAGTCCTTG AACACCCATGGATGAGAGAAGGTGGAGATGCATCTGATAAACCAATCGATAEST: gi|24136888|gb|BU927398.1|BU927398
genomic: GATGCTGACACAGGATCCAAACAAGCGGATTACTTCTTCTCAAGTCCTTGgtactagatt ... gtttggtaagAACACCCATGGATGAGAGAAGGTGGAGATGCATCTGATAAACCAATCGATA
EST: GATGCTGACACAGGATCCAAACAAGCGGATTACTTCTTCTCAAGTCCTTG AACACCCATGGATGAGAGAAGGTGGAGATGCATCTGATAAACCAATCGATA
genomic: GATGCTGACACAGGATCCAAACAAGCGGATTACTTCTTCTCAAGTCCTTGgtactagatt ... gtttggtaagAACACCCATGGATGAGAGAAGGTGGAGATGCATCTGATAAACCAATCGATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTGAACCATGGCCATCCATATCAGACAGTGCTAAAGACCTAGTCAGGAAGATGCTGACACAGGATCCAAACAAGCGGATTACTTCTTCTCAAGTCCTTGgtactagattactctttctgttttgactaaagtaacttttatcaacacagtatttatttaatctaattaaattaaaaagtgttattttttttgttagtac
- - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaattaaa