1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TAAGAATTTGATGTCAAAAGGGACATTGGGTGCTCAGATGGTTGACCTTCAGCTGGCACAAGTTGTCCTGAGTTTAAAAGCACAAGCATGGAGTGATGAGgtgagataatttgaacctacattaacttctgaaaatttatttgtgcaaattgtgtaaaattataattggtgccttgaatagaaaatatttttgatataca...
species | Glycine max |
transcript | GLYMA02G06710.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AGCTGGCACAAGTTGTCCTGAGTTTAAAAGCACAAGCATGGAGTGATGAG GACTTGTTGGAGGCCCTGAATTCCTTGGAAGAAGGGCTTAAGGATAATATCEST: gi|9258429|gb|BE346576.1|BE346576
genomic: AGCTGGCACAAGTTGTCCTGAGTTTAAAAGCACAAGCATGGAGTGATGAGgtgagataat ... tttgttatagGACTTGTTGGAGGCCCTGAATTCCTTGGAAGAAGGGCTTAAGGATAATATC
EST: AGCTGGCACAAGTTGTCCTGAGTTTAAAAGCACAAGCATGGAGTGATGAG GACTTGTTGGAGGCCCTGAATTC-TTGG
genomic: AGCTGGCACAAGTTGTCCTGAGTTTAAAAGCACAAGCATGGAGTGATGAGgtgagataat ... tttgttatagGACTTGTTGGAGGCCCTGAATTCCTTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAAGAATTTGATGTCAAAAGGGACATTGGGTGCTCAGATGGTTGACCTTCAGCTGGCACAAGTTGTCCTGAGTTTAAAAGCACAAGCATGGAGTGATGAGgtgagataatttgaacctacattaacttctgaaaatttatttgtgcaaattgtgtaaaattataattggtgccttgaatagaaaatatttttgatataca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aatagaaa