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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAATTTTCAGAATCGATTTCGAAGAGCTGCTTCGTCTTTGCTCCACCAAAATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCGgtaataatccttattttgtttttaattttaaatttttgtaattttctctgtcattttgcatcgaacacttttttcttaatatgtttatcttgtgtattgg...

Basic information

species Glycine max
transcript GLYMA15G40750.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209719408|gb|BW674488.1|BW674488
EST:     ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCG                         ATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
genomic: ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCGgtaataatcc ... gtacatgcagATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
EST: gi|209700869|gb|BW683099.1|BW683099
EST:     ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCG                         ATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
genomic: ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCGgtaataatcc ... gtacatgcagATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
EST: gi|192301270|gb|FG990190.1|FG990190
EST:     ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCG                         ATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
genomic: ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCGgtaataatcc ... gtacatgcagATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
EST: gi|192298646|gb|FG988557.1|FG988557
EST:     ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCG                         ATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
genomic: ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCGgtaataatcc ... gtacatgcagATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
EST: gi|213612205|gb|DB956886.1|DB956886
EST:     ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCG                         ATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
genomic: ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCGgtaataatcc ... gtacatgcagATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
EST: gi|192296353|gb|FG991591.1|FG991591
EST:     ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCG                         ATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG
genomic: ATTCTTCACCGTTGTAGTTGTACTCAGCCACTCGGAGACACCGCTAATCGgtaataatcc ... gtacatgcagATAGTTTAGTTGGCAAGTCATAAATTAGTTTCATCTCTTAAGATTTCATTG