1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACGgtaagtatcttgagtttgttagtagcttcatagtgtgatattgtgttataaatatctgaatagttgatgctagcatgattacagtttagtatctaactta...
species | Arabidopsis thaliana |
transcript | AT5G37480.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACG GGTTTTGCAAATGATTCAACACCAGAAATCGGAGAGCAAAGEST: gi|164224213|gb|EL972208.1|EL972208
genomic: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACGgtaagtatct ... tgctttgcagGGTTTTGCAAATGATTCAACACCAGAAATCGGAGAGCAAAG
EST: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACG GGTTTTGCAAAGGATTCAGCACCAGAAATCGGAGAGCAAAGTCTGAAATACEST: gi|164050735|gb|ES005962.1|ES005962
genomic: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACGgtaagtatct ... tgctttgcagGGTTTTGCAAATGATTCAACACCAGAAATCGGAGAGCAAAGTCTGAAATAC
EST: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACG GGTTTTGCAAAGGATTCAEST: gi|164194396|gb|ES057420.1|ES057420
genomic: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACGgtaagtatct ... tgctttgcagGGTTTTGCAAATGATTCA
EST: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACG GGTTTTGCAAAGGATTCAGCACCAGAAAEST: gi|125252076|gb|EL266161.1|EL266161
genomic: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACGgtaagtatct ... tgctttgcagGGTTTTGCAAATGATTCAACACCAGAAA
EST: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACG GGTTTTGCAAATGATTCAACACCAGAAATCGGAGAGCAAAGTCT
genomic: GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACGgtaagtatct ... tgctttgcagGGTTTTGCAAATGATTCAACACCAGAAATCGGAGAGCAAAGTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACGGAGAAAAACAATCGACAACAGCGGTTTTCTTCTGTATTTTCGACGgtaagtatcttgagtttgttagtagcttcatagtgtgatattgtgttataaatatctgaatagttgatgctagcatgattacagtttagtatctaactta
- - GGAGAA