1 5' 3' | 2 5' 3' | 3 5' 3' |
gtttcaattgtgttagaatatagatgagtgctcaagttaatatccaactaaaatgaatatactcgtgctaattaccgcacaactctccagGTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGATATGACTCAGAAATACAAGGACGCTTCCGTTGACAATAAAAATCTAACAG
species | Zea mays |
transcript | GRMZM2G073427_T04 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAG GTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGATEST: gi|149077399|gb|EE166085.2|EE166085
genomic: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAGgtttcaattg ... aactctccagGTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGAT
EST: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAG GTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGATEST: gi|211441179|gb|FL267162.1|FL267162
genomic: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAGgtttcaattg ... aactctccagGTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGAT
EST: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAG GTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGATEST: gi|211302896|gb|FL267161.1|FL267161
genomic: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAGgtttcaattg ... aactctccagGTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGAT
EST: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAG GTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGATEST: gi|211441180|gb|FL267163.1|FL267163
genomic: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAGgtttcaattg ... aactctccagGTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGAT
EST: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAG GTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGATEST: gi|211441181|gb|FL267164.1|FL267164
genomic: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAGgtttcaattg ... aactctccagGTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGAT
EST: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAG GTTTCCAGGTTAACGTCTGAAGA-TGCATCTTTTGCTGAAGCGACTGGCTGEST: gi|211302889|gb|FL267154.1|FL267154
genomic: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAGgtttcaattg ... aactctccagGTTTCCAGGTTAACGTCTGA-GAATGCATCTTT-GCTGAAGCGACTGGCTG
EST: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAG GTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGAT
genomic: GGCGATCAAGAAAGAGGAAGCAAGCACACTTGACCGATCTTGAATCACAGgtttcaattg ... aactctccagGTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGAT
gttaatatccaactaaaatgaatatactcgtgctaattaccgcacaactctccagGTTTCCAGGTTAACGTCTGAGAATGCATCTTTGCTGAAGCGACTGGCTGATATGACTCAGAAATACAAGGACGCTTCCGTTGACAATAAAAATCTAACAG
tgctaat putative branch site (score: 2)
ctctcc putative PPT
aactaaaatgaatata TA-rich tract