1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtatacttctctcttttgttgatgacagatatatgtgtttatcgcttagaatactctaaagaaatgaggggaacttgtataagtgttggtaagagtgttcgcctaatttaaaatgttatttttgggggttttgcagTGCTGGGATCCCAGGGCGATCGAGACAAAGCCAAACGACCTCTGATGGCTAAAATTGCTACCGACAAAAGTGATGTATGTATATTTACATCTGACAATCC
species | Physcomitrella patens |
transcript | PP1S101_215V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GAGATTGTTAGATACAGTGCGAGAGTGTGGTCCAAGGAGAATTATCACAG TGCTGGGATCCCAGGGCGATCGAGACAAAGCCAAACGACCTCTGATGGCTAEST: gi|162149663|gb|FC326714.1|FC326714
genomic: GAGATTGTTAGATACAGTGCGAGAGTGTGGTCCAAGGAGAATTATCACAGgtatacttct ... ggttttgcagTGCTGGGATCCCAGGGCGATCGAGACAAAGCCAAACGACCTCTGATGGCTA
EST: GAGATTGTTAGATACAGTGCGAGAGTGTGGTCCAAGGAGAATTATCACAG TGCTGGGATCCCAGGGCGATCGAGACAAAGCCAAACGACCTCTGATGGCTA
genomic: GAGATTGTTAGATACAGTGCGAGAGTGTGGTCCAAGGAGAATTATCACAGgtatacttct ... ggttttgcagTGCTGGGATCCCAGGGCGATCGAGACAAAGCCAAACGACCTCTGATGGCTA
agtgttggtaagagtgttcgcctaatttaaaatgttatttttgggggttttgcagTGCTGGGATCCCAGGGCGATCGAGACAAAGCCAAACGACCTCTGATGGCTAAAATTGCTACCGACAAAAGTGATGTATGTATATTTACATCTGACAATCC
gcctaat putative branch site (score: 3)
taatttaaaatgttat TA-rich tract