1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtttgccatttttaagctcccttcattctagttcttggaactggttgaagcaataaacctccccaattaatctttctaatcagaattactttctgttgttgtggccgttattttactaaatatttggttttgtgatgtaatcgtgtattatggttttattgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTG
species | Arabidopsis thaliana |
transcript | AT5G14030.3 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACEST: gi|116459815|gb|EG502407.1|EG502407
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAAC
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|86022135|gb|DR317888.1|DR317888
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCEST: gi|86022136|gb|DR317889.1|DR317889
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGC
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTEST: gi|86022143|gb|DR317896.1|DR317896
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATEST: gi|124975197|gb|EL048709.1|EL048709
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATAT
EST: CATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|125259594|gb|EL273679.1|EL273679
genomic: CATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: CTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|86022153|gb|DR317906.1|DR317906
genomic: CTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|116399796|gb|EG442388.1|EG442388
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|86022138|gb|DR317891.1|DR317891
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|86022144|gb|DR317897.1|DR317897
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|125205642|gb|EL220596.1|EL220596
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: TACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAEST: gi|164203880|gb|ES171461.1|ES171461
genomic: TACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACA
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCEST: gi|86022131|gb|DR317884.1|DR317884
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACC
EST: GTGSTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GA-GCATACTCEST: gi|86022151|gb|DR317904.1|DR317904
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTC
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCEST: gi|86022157|gb|DR317910.1|DR317910
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGC
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|164231557|gb|EL988251.1|EL988251
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: CCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|86022137|gb|DR317890.1|DR317890
genomic: CCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAAEST: gi|86022146|gb|DR317899.1|DR317899
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAA
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCAEST: gi|124718550|gb|EH809952.1|EH809952
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCA
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTAEST: gi|86022158|gb|DR317911.1|DR317911
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTA
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAAEST: gi|116459826|gb|EG502418.1|EG502418
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAA
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|125049818|gb|EL122087.1|EL122087
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCEST: gi|124926105|gb|EL003999.1|EL003999
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCC
EST: ATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|124840569|gb|EH925008.1|EH925008
genomic: ATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: CACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|163991772|gb|ES189033.1|ES189033
genomic: CACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGAEST: gi|86022145|gb|DR317898.1|DR317898
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGA
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACEST: gi|124930253|gb|EL007721.1|EL007721
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGAC
EST: CCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|116459820|gb|EG502412.1|EG502412
genomic: CCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|164170499|gb|ES167748.1|ES167748
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: TCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|164171026|gb|ES026648.1|ES026648
genomic: TCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: TGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTEST: gi|124880350|gb|EH959252.1|EH959252
genomic: TGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCEST: gi|125214060|gb|EL228714.1|EL228714
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCC
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATAEST: gi|164135607|gb|EL998202.1|EL998202
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATA
EST: CTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|116459814|gb|EG502406.1|EG502406
genomic: CTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|116459825|gb|EG502417.1|EG502417
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|164006832|gb|ES162352.1|ES162352
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTACCACTACTACCTCTAGATATCCTCGCAGAEST: gi|125086338|gb|EL145843.1|EL145843
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACT-CCACTACTACCTCTAGATATCCTCGCAGA
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTEST: gi|163979826|gb|ES135507.1|ES135507
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCT
EST: TGCTCCTGCTGTCGTTACTTTCCGCACTCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCEST: gi|124859111|gb|EH943548.1|EH943548
genomic: TGCTCCTGCTGTCGTTACTTTCCGCA-TCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACC
EST: CTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTEST: gi|124997804|gb|EL070073.1|EL070073
genomic: CTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: TGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTACAG GAAGCATACTCAACTCCACTACTACEST: gi|164058071|gb|ES200602.1|ES200602
genomic: TGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTT-CAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTAC
EST: TCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCNGACAAACCTEST: gi|86022139|gb|DR317892.1|DR317892
genomic: TCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCT
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCEST: gi|164172200|gb|EL971880.1|EL971880
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTC
EST: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAG GAAGCATACTCAACTCC
genomic: GTGCTCCTGCTGTCGTTACTTTCCGCATCCCCACTAAGCCAGCTCTTCAGgtttgccatt ... ttgtttgtagGAAGCATACTCAACTCC
tactaaatatttggttttgtgatgtaatcgtgtattatggttttattgtttgtagGAAGCATACTCAACTCCACTACTACCTCTAGATATCCTCGCAGACAAACCTCCAACGAAACCTTTGGACGTG
tactaaa putative branch site (score: 1)
ttttatt putative PPT
tattatggttttatt TA-rich tract