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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCTCCGCCTCCTCCTCGGCGTCATGGGCGCGCCGCTCGCGCCCGTCTCGGTCTCCACCGCCGAGCCGCTGCCGCTCGCGCCCGTCAAGGGCGCCCCCATTgtgcgtacacgcctcggttttttctctcctggatctccactgttttcacgcctggctttggcaaatgcggcagcgttttgggccttgactcctccggcggctctggatctggtatttatggcgttgcag

Basic information

species Zea mays
transcript GRMZM5G897980_T01
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37424727|gb|CF650096.1|CF650096
EST:     TCTCCACCGCCGAGCCGCTGCCGCTCGCGCCCGTCAAGGGCGCCCCCATT                         GAATCCTCGTCGGCGCAGTACATCCTGCAGCAGTACTTGGCGGCGTCGGGT
genomic: TCTCCACCGCCGAGCCGCTGCCGCTCGCGCCCGTCAAGGGCGCCCCCATTgtgcgtacac ... ggcgttgcagGAATCCTCGTCGGCGCAGTACATCCTGCAGCAGTACTTGGCGGCGTCGGGT