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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gttgcccaagagaccaagggtgctcacaggctgtgtgtgacctcgaagtttcctttcacctttgtctgcatgtaaaactaacctgttcttccaaacacagGTTGTAATGTCTGGTGCCTTGTTGTGA

Basic information

species Zea mays
transcript GRMZM5G891037_T01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aagtttcctttcacctttgtctgcatgtaaaactaacctgttcttccaaacacagGTTGTAATGTCTGGTGCCTTGTTGTGA
                              aactaac  putative branch site (score: 1)
                                    cctgttcttcc  CT-rich tract
                           taaaactaa  TA-rich tract