1 5' 3' |
...gcgggccgaggaacgccgccgccagctggcccctctgatgctgctgccgccgctgtgccaagagctgcgaatggatctggtggatttgcgccgggcccagGTGGTTCAGCGCCAGCCCCGACGCGGCGTCCACCGACGACGTCGGGCACGACGACGACGCCGGAGAGGCGTACGACGAGGAGGACTGGGGCAGAGGCGGG
species | Zea mays |
transcript | GRMZM5G889179_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gcgggccgaggaacgccgccgccagctggcccctctgatgctgctgccgccgctgtgccaagagctgcgaatggatctggtggatttgcgccgggcccagGTGGTTCAGCGCCAGCCCCGACGCGGCGTCCACCGACGACGTCGGGCACGACGACGACGCCGGAGAGGCGTACGACGAGGAGGACTGGGGCAGAGGCGGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
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- - - - - - - gccgccg
- - - - - - - - - - -ccagctg
- - - - - - - - - - - - - - - - - - - -gctgctg
- - - - - - - - - - - - - - - - - - - - - - - - gccgctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gagctgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctggtgg