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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCGCTGAGCCTATTGGTTCTTTATTATTGTCAGAGgtatgcaatatgctatcgctaggtgttcatgttgtaataatattcatttcttgctccaggctgaaggggactaaattttatcctctttctgtag

Basic information

species Zea mays
transcript GRMZM5G879737_T01
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM5G879737_T01 (Zea mays), 5'ss of exon 4
lower sequence: LOC_Os10g26610.2 (Oryza sativa), 5'ss of exon 3
------TCGCTGAGCCTATTGGTTCTTTATTATTGTCAGAGgtatgcaatatgctatcgctaggtgt---tcatgttgtaataatattcatttcttgctccaggctgaaggggactaaattttatcctctttctgtag
      | |||||||| |||||| | || |||||||||||||||||| ||||| |     || ||||   | || || | ||||  ||| |||||   | ||  ||  || ||||   ||||| | |||||| |||||
TCTCGGTGGCTGAGCCAATTGGTGCATTGTTATTGTCAGAGgtatgccatatgatggttttacgtgtatcttatattctgataa-gttcttttctcctttcatacttcagaggacctgattttcttctctttttgtag