1 5' 3' | 2 5' 3' | 3 5' 3' |
GCTTACGAACCTGGATGGACGGCCTCCCAACAAGAAATGGAGTTAAGTTCTATTGAAACATGATGAGTGCATTCTCATTTTATCTTTCTAATTGGCAAAGgtataatagtgctccttaggtttcagaattgttttttatggtacaacaaacaacatacaatcaagagatttatttttcaagttccatctctaacctaccc...
species | Zea mays |
transcript | GRMZM5G871936_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TATTGAAACATGATGAGTGCATTCTCATTTTATCTTTCTAATTGGCAAAG GAGCCAGCCTCAGTAAATTTTGATGTATTACCAACCTTGGATATGTTTTGAEST: gi|211498627|gb|FL475532.1|FL475532
genomic: TATTGAAACATGATGAGTGCATTCTCATTTTATCTTTCTAATTGGCAAAGgtataatagt ... tcttctgcagGAGCCAGCCTCAGTAAATTTTGATGTATTACCAACCTTGGATATGTTTTGA
EST: TATTGAAACATGATGAGTGCATTCTCATTTTATCTTTCTAATTGGCAAAG GAGCCAGCCTCAGTAAATTTTGATGTATTACCAACCTTGGATATGTTTTGA
genomic: TATTGAAACATGATGAGTGCATTCTCATTTTATCTTTCTAATTGGCAAAGgtataatagt ... tcttctgcagGAGCCAGCCTCAGTAAATTTTGATGTATTACCAACCTTGGATATGTTTTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTTACGAACCTGGATGGACGGCCTCCCAACAAGAAATGGAGTTAAGTTCTATTGAAACATGATGAGTGCATTCTCATTTTATCTTTCTAATTGGCAAAGgtataatagtgctccttaggtttcagaattgttttttatggtacaacaaacaacatacaatcaagagatttatttttcaagttccatctctaacctaccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -acaaacaa