Sequence
atgc intronic sequence ATGC exonic sequence...cgcgctctgggccgccgccgctcgtgctgcctcagcgctacctgatgcgctggaggccggcgtgtctgtcgtctctaacaggcttgagtccgtcggccagGTCGTTGACGACCTCCGTGCCGCCACCGCTGGGCTCCTCTCGCATGCCAACAAGGCCCTCCGGTCCGCTGAAGCTGACGGTGTTGATGGTGACCGTGCCG
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.tgcgctggaggccggcgtgtctgtcgtctctaacaggcttgagtccgtcggccagGTCGTTGACGACCTCCGTGCCGCCACCGCTGGGCTCCTCTCGCATGCCAACAAGGCCCTCCGGTCCGCTGAAGCTGACGGTGTTGATGGTGACCGTGCCG
ctctaac putative branch site (score: 2)
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
cgcgctctgggccgccgccgctcgtgctgcctcagcgctacctgatgcgctggaggccggcgtgtctgtcgtctctaacaggcttgagtccgtcggccagGTCGTTGACGACCTCCGTGCCGCCACCGCTGGGCTCCTCTCGCATGCCAACAAGGCCCTCCGGTCCGCTGAAGCTGACGGTGTTGATGGTGACCGTGCCG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
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- - - - - gccgccg
- - - - - - - - - - - -gtgctgc
- - - - - - - - - - - - - - - - - - - - -ctgatgc
- - - - - - - - - - - - - - - - - - - - - - - - gctggag