1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCCTGTTCTCAGCCCGCCGCTTCTCAGTCCACTTCTGCCGCAGCCCCTCTTCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatcatactcgagcttgcttggattccctagtccgaagggctttgttggcaatcgaaccctaaaatccttcttctgattcgttcagttagttgt...
species | Zea mays |
transcript | GRMZM5G830874_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|211100061|gb|FL053947.1|FL053947
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|32913919|gb|CF018731.1|CF018731
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACTTTCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|78087617|gb|DV516010.1|DV516010
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|211102529|gb|FL053950.1|FL053950
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|91869838|gb|EB400566.1|EB400566
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|211100063|gb|FL053949.1|FL053949
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCASCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|78110729|gb|DV529127.1|DV529127
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|78081916|gb|DV510328.1|DV510328
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|4688467|gb|AI637137.1|AI637137
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACTEST: gi|211100057|gb|FL053943.1|FL053943
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
EST: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCG GCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
genomic: TCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatc ... tgtctaatagGCACGGAGAACAATCACTTTAGAAGACTTGTACTCCTTGGCGTGTCATACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCTGTTCTCAGCCCGCCGCTTCTCAGTCCACTTCTGCCGCAGCCCCTCTTCTCTCGGTCTAGAGATCCGTCCGGGCGCGGCAGCCTCGCTTTCGTTTCGgtaagcaatcatactcgagcttgcttggattccctagtccgaagggctttgttggcaatcgaaccctaaaatccttcttctgattcgttcagttagttgt
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