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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgacattacttgatctttgatgccatgccatttttttgaacaggcaggtgttatgccacagtacacttgatactttctattaaactgcaaattttctttagGTGGATGCCCAGTTATAAAAGGCAACAAATGGTCATCGACGAAGTGGATGCGTGTTCATGAGTACAAAGTTTAGATACAAAAAGACACAGAACTTGAGGT

Basic information

species Zea mays
transcript GRMZM5G825935_T01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggtgttatgccacagtacacttgatactttctattaaactgcaaattttctttagGTGGATGCCCAGTTATAAAAGGCAACAAATGGTCATCGACGAAGTGGATGCGTGTTCATGAGTACAAAGTTTAGATACAAAAAGACACAGAACTTGAGGT
                  acttgat  putative branch site (score: 5)
                                             ttttcttt  putative PPT
                       atactttctattaaa  TA-rich tract