1 5' 3' | 2 5' 3' |
...gtagcagcctaggcctagcctagctagcaggagctgggctaggagaagctgagcaacagacaatgcgtgggacggcggcggcggcggcgtggtgcgctgcCGGTGAAGATGGTGAGGCGTGACCGCGTGAGGCTGGGGTCGCTACATATCTCCGACCAGTCTAGTGCTCCTTGTGTTAAAATATTTGGGAT
species | Zea mays |
transcript | GRMZM5G817972_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCTTTTGCGATGAGTCTGTAGTCCCGCTGCTCCTTGTCCTGGCGCGCCGC CGGTGAAGATGGTGAGGCGTGACCGCGTGAGGCTGGGGTCGCTACATATCTEST: gi|211150271|gb|FL051350.1|FL051350
genomic: GCTTTTGCGATGAGTCTGTAGTCCCGCTGCTCCTTGTCCTGGCGCGCCGCcgccgccgcc ... ggtgcgctgcCGGTGAAGATGGTGAGGCGTGACCGCGTGAGGCTGGGGTCGCTACATATCT
EST: GCTTTTGCGATGAGTCTGTAGTCCCGCTGCTCCTTGTCCTGGCGCGCCGC CGGTGAAGATGGTGAGGCGTGACCGCGTGAGGCTGGGGTCGCTACATATCT
genomic: GCTTTTGCGATGAGTCTGTAGTCCCGCTGCTCCTTGTCCTGGCGCGCCGCcgccgccgcc ... ggtgcgctgcCGGTGAAGATGGTGAGGCGTGACCGCGTGAGGCTGGGGTCGCTACATATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtagcagcctaggcctagcctagctagcaggagctgggctaggagaagctgagcaacagacaatgcgtgggacggcggcggcggcggcgtggtgcgctgcCGGTGAAGATGGTGAGGCGTGACCGCGTGAGGCTGGGGTCGCTACATATCTCCGACCAGTCTAGTGCTCCTTGTGTTAAAATATTTGGGAT
gtagcag
- - - - - - - - - - - - - - -ggagctg
- - - - - - - - - - - - - - - - - - - - - - gaagctg
- - - - - - - - - - - - - - - - - - - - - - - - - - gcaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - atgcgtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cggcggc