Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|87154786|gb|DY399575.1|DY399575EST: AGTACACTGTCATCCAAGGCAAGCTTGGTGCTGTTATTCGTGGCAAGAAG GGATCCGGTCTGTGAGGCCAATAGTATCCTTTATTTATATTTTTCATGTGA
genomic: AGTACACTGTCATCCAAGGCAAGCTTGGTGCTGTTATTCGTGGCAAGAAGgtatttaact ... ttgttcccagGGATCCGGTCTGTGAGGCCAATAGTATCCTTTATTTATATTTTTCATGTGA
EST:
gi|22545102|gb|BU097461.1|BU097461EST: AGTACACTGTCATCCAAGGCAAGCTTGGTGCTGTTATTCGGGGCAAGAAG GGATCCGGTCTGTGAGGCCAATAGTATCCTTTATTTATATTTTTCATGTGA
genomic: AGTACACTGTCATCCAAGGCAAGCTTGGTGCTGTTATTCGTGGCAAGAAGgtatttaact ... ttgttcccagGGATCCGGTCTGTGAGGCCAATAGTATCCTTTATTTATATTTTTCATGTGA
EST:
gi|26455623|gb|CA827206.1|CA827206EST: AGTACACTGTCATCCAAGGCAAGCTTGGTGCTGTTATTCGTGGCAAGAAA GGATCCGGTCTGTGAG
genomic: AGTACACTGTCATCCAAGGCAAGCTTGGTGCTGTTATTCGTGGCAAGAAGgtatttaact ... ttgttcccagGGATCCGGTCTGTGAG
EST:
gi|87154165|gb|DY398954.1|DY398954EST: AGTACACTGTCATCCAAGGCAAGCTTGGTGCTGTTATTCGTGGCAAGAAG GGATCCGGTCTGTGAGGCCAATAGTATCCTTTATTTATATTTTTCATGTGA
genomic: AGTACACTGTCATCCAAGGCAAGCTTGGTGCTGTTATTCGTGGCAAGAAGgtatttaact ... ttgttcccagGGATCCGGTCTGTGAGGCCAATAGTATCCTTTATTTATATTTTTCATGTGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGCGGGGGCACCGTACCTTGCCTCGACCGGCCTGTTCCTGGGAGCCACCAAGTACACTGTCATCCAAGGCAAGCTTGGTGCTGTTATTCGTGGCAAGAAGgtatttaactgcccatcgaacgtcgcaacgcgactgctccatcctctttgatccgattcattcccaactgttgctgcctttgttgttcccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG